Search results for "two-component system"
showing 9 items of 9 documents
Large Number Asymptotics for Two-Component Systems with Self-Consistent Coupling
2014
We shall consider the large number asymptotics of particle models for partial differential equations describing two component mixtures with simplest kind of self-consistent couplings. We shall recall in particular two examples related to different classes of models, the first one having both particle-like components and the second one having only one particle-like component (the other being described as a fluid); for these examples, different techniques on the probabilistic and analytic point of view are to be used to rigorously prove the convergence to a limit of the self-consistent terms in a “mean-field”-like asymptotics. The two models were analysed resp. in Bernardin and Ricci (Kinet R…
Study of the cwaRS-ldcA Operon Coding a Two-Component System and a Putative L,D-Carboxypeptidase in Lactobacillus paracasei
2020
International audience; The cell surface is the primary recognition site between the bacterium and the host. An operon of three genes, LSEI_0219 (cwaR), LSEI_0220 (cwaS), and LSEI_0221 (ldcA), has been previously identified as required for the establishment of Lactobacillus paracasei in the gut. The genes cwaR and cwaS encode a predicted two-component system (TCS) and ldcA a predicted D-alanyl-D-alanine carboxypeptidase which is a peptidoglycan (PG) biosynthesis enzyme. We explored the functionality and the physiological role of these three genes, particularly their impact on the bacterial cell wall architecture and on the bacterial adaptation to environmental perturbations in the gut. The …
Identification des gènes impliqués lors de l'établissement de Lactobacillus casei dans l'intestin et caractérisation de l'opéron LSEI_0219-0221
2014
In bacteria which are in direct contact with their environment, genes transcription and proteins synthesis are efficiently regulated at each change of environmental parameters to allow cell survival. For intestinal commensal bacteria, these regulations must also allow symbiotic interactions and colonization whose molecular mechanisms, so far little known, are probably related, among others, to the bacteria surface (molecules exposed and secreted…). Lactobacillus casei, a commensal bacterium, has about 330 predicted genes involved in the composition and functionality of the cell surface. To have a global view of the whole genes involved in the establishment of L. casei in the gut, a reverse …
Large number asymptotics of two-component systems
2012
We shall analyze the asymptotics of two-component systems with at least one particle component when the number of particles becomes large; choosing suitable scalings for the parameters, we find the set of coupled partial differential equations modeling those systems in the limit.
Small RNA‐binding protein RapZ mediates cell envelope precursor sensing and signaling in Escherichia coli
2019
Abstract The RNA‐binding protein RapZ cooperates with small RNAs (sRNAs) GlmY and GlmZ to regulate the glmS mRNA in Escherichia coli. Enzyme GlmS synthesizes glucosamine‐6‐phosphate (GlcN6P), initiating cell envelope biosynthesis. GlmZ activates glmS expression by base‐pairing. When GlcN6P is ample, GlmZ is bound by RapZ and degraded through ribonuclease recruitment. Upon GlcN6P depletion, the decoy sRNA GlmY accumulates through a previously unknown mechanism and sequesters RapZ, suppressing GlmZ decay. This circuit ensures GlcN6P homeostasis and thereby envelope integrity. In this work, we identify RapZ as GlcN6P receptor. GlcN6P‐free RapZ stimulates phosphorylation of the two‐component sy…
Modelling of Systems with a Dispersed Phase: “Measuring” Small Sets in the Presence of Elliptic Operators
2016
When modelling systems with a dispersed phase involving elliptic operators, as is the case of the Stokes or Navier-Stokes problem or the heat equation in a bounded domain, the geometrical structure of the space occupied by the dispersed phase enters in the homogenization process through its capacity, a quantity which can be used to define the equivalence classes in \(H^1\). We shall review the relationship between capacity and homogenization terms in the limit when the number of inclusions becomes large, focusing in particular on the situation where the distribution of inclusions is not necessarily too regular (i.e. it is not periodic).
C4-dicarboxylate carriers and sensors in bacteria
2002
AbstractBacteria contain secondary carriers for the uptake, exchange or efflux of C4-dicarboxylates. In aerobic bacteria, dicarboxylate transport (Dct)A carriers catalyze uptake of C4-dicarboxylates in a H+- or Na+-C4-dicarboxylate symport. Carriers of the dicarboxylate uptake (Dcu)AB family are used for electroneutral fumarate:succinate antiport which is required in anaerobic fumarate respiration. The DcuC carriers apparently function in succinate efflux during fermentation. The tripartite ATP-independent periplasmic (TRAP) transporter carriers are secondary uptake carriers requiring a periplasmic solute binding protein. For heterologous exchange of C4-dicarboxylates with other carboxylic …
Optogenetic Control of Bacterial Expression by Red Light
2022
In optogenetics, as in nature, sensory photoreceptors serve to control cellular processes by light. Bacteriophytochrome (BphP) photoreceptors sense red and far-red light via a biliverdin chromophore and, in response, cycle between the spectroscopically, structurally, and functionally distinct Pr and Pfr states. BphPs commonly belong to two-component systems that control the phosphorylation of cognate response regulators and downstream gene expression through histidine kinase modules. We recently demonstrated that the paradigm BphP from Deinococcus radiodurans exclusively acts as a phosphatase but that its photosensory module can control the histidine kinase activity of homologous receptors.…
Derivation of Models for Thin Sprays from a Multiphase Boltzmann Model
2017
We shall review the validation of a class of models for thin sprays where a Vlasov type equation is coupled to an hydrodynamic equation of Navier–Stokes or Stokes type. We present a formal derivation of these models from a multiphase Boltzmann system for a binary mixture: under suitable assumptions on the collision kernels and in appropriate asymptotics (resp. for the two different limit models), we prove the convergence of solutions to the multiphase Boltzmann model to distributional solutions to the Vlasov–Navier–Stokes or Vlasov–Stokes system. The proofs are based on the procedure followed in Bardos et al. (J Stat Phys 63:323–344 (1991), [2]) and explicit evaluations of the coupling term…